C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single-pass membrane protein with coiled-coil domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316048 SMCO3-001 ENSG00000179256 9606 - 12:14804650-14814182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000316048
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000316048 0.184±0.00 0.613±0.00 0.027±0.00 0.128±0.00 0.248±0.04 0.084±0.00 1.196±0.00 0.199±0.05 0.251±0.22 0.106±0.04 0.302±0.01 0.120±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036X CIL_00036X_0001 CGP 12:14784579-14906586
CIL_00036Y CIL_00036Y_0001 CGP 12:14803572-14906586
CIL_00036Z CIL_00036Z_0001 CGP 12:14804650-14843495

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111894 Smco3-002 protein_coding Mus_musculus 0 656
ENSMUST00000068293 Smco3-001 protein_coding Mus_musculus 0 656

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