C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paraneoplastic Ma antigen 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316836 PNMA1-001 ENSG00000176903 9606 - 14:73711783-73714372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316836 18.677±0.00 26.135±0.00 3.304±0.00 53.898±29.70 18.586±13.69 23.457±19.99 5.036±4.07 13.830±12.91 6.656±4.90 8.264±6.43 3.889±2.31 31.349±30.88 19.459±2.74 93.045±17.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0001 VISTA 14:73441559-74042582
CIL_0004A0 CIL_0004A0_0001 CGP 14:73644875-73714372
CIL_0001TU CIL_0001TU_0001 CGP 14:73711783-73790285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002437 ISS inflammatory response to antigenic stimulus
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005925 IDA focal adhesion
GO:0043065 ISS positive regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061425 Pnma1-001 protein_coding Mus_musculus 0 1230

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