C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WSC domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317744 WSCD1-201 ENSG00000179314 9606 + 17:6070614-6124425 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317744 2.576±0.00 1.098±0.00 0.809±0.00 1.536±0.31 0.700±0.25 1.732±0.06 0.795±0.56 1.343±1.24 0.277±0.13 0.251±0.00 1.494±0.38 0.381±0.27 3.967±0.26 1.085±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N1 CIL_0000N1_0001 CGP 17:5499427-6124427
CIL_0000P5 CIL_0000P5_0001 CGP 17:5772234-6435199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108510 Wscd1-002 protein_coding Mus_musculus 0 1629
ENSMUST00000108511 Wscd1-001 protein_coding Mus_musculus 0 1629
ENSMUST00000021168 Wscd1-003 protein_coding Mus_musculus 0 1629
ENSMUST00000138339 Wscd1-006 retained_intron Mus_musculus 0 353
ENSMUST00000150531 Wscd1-004 protein_coding Mus_musculus 0 342

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