C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: shisa family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319234 SHISA3-001 ENSG00000178343 9606 + 4:42397839-42402487 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319234 1.628±0.00 11.368±0.00 1.113±0.00 0.075±0.05 1.056±0.43 2.046±1.50 3.585±2.89 19.326±0.00 0.683±0.53 6.109±0.00 0.347±0.00 0.055±0.02 0.089±0.07 0.763±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OI CIL_0007OI_0001 UCNEbase 4:41748045-42425642
CIL_0007YP CIL_0007YP_0001 VISTA 4:41848074-42449047
CIL_0002Z3 CIL_0002Z3_0001 CGP 4:42110938-42402487
CIL_0002Z0 CIL_0002Z0_0001 CGP 4:42397839-42657105

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087241 Shisa3-001 protein_coding Mus_musculus 0 824

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