C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tachykinin, precursor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319273 TAC1-001 ENSG00000006128 9606 + 7:97731908-97740472 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLungENST00000319273
Transcript ID Brain Breast Colon Kidney Lung
ENST00000319273 1.889±0.51 0.480±0.00 0.631±0.00 0.104±0.00 0.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BH CIL_0003BH_0002 CGP 7:97116590-97740472
CIL_0005L4 CIL_0005L4_0002 CGP 7:97731908-97872542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002675 IEA positive regulation of acute inflammatory response
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 IEA extracellular space
GO:0005886 IEA plasma membrane
GO:0006954 IEA inflammatory response
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0007217 IEA tachykinin receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0007268 IEA synaptic transmission
GO:0007320 TAS insemination
GO:0007616 IEA long-term memory
GO:0008217 IEA regulation of blood pressure
GO:0008306 IEA associative learning
GO:0009582 TAS detection of abiotic stimulus
GO:0009725 IEA response to hormone
GO:0010459 IEA negative regulation of heart rate
GO:0010634 IEA positive regulation of epithelial cell migration
GO:0019233 IEA sensory perception of pain
GO:0030424 IEA axon
GO:0031835 IEA substance P receptor binding
GO:0032224 IEA positive regulation of synaptic transmission, cholinergic
GO:0032230 IEA positive regulation of synaptic transmission, GABAergic
GO:0032496 IEA response to lipopolysaccharide
GO:0035815 IEA positive regulation of renal sodium excretion
GO:0043025 IEA neuronal cell body
GO:0043278 IEA response to morphine
GO:0045760 IEA positive regulation of action potential
GO:0045778 IEA positive regulation of ossification
GO:0046878 IEA positive regulation of saliva secretion
GO:0048265 IEA response to pain
GO:0050671 IEA positive regulation of lymphocyte proliferation
GO:0051496 IEA positive regulation of stress fiber assembly
GO:2000854 IEA positive regulation of corticosterone secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185187 Tac1-001 protein_coding Mus_musculus 0 965
ENSMUST00000090679 Tac1-004 protein_coding Mus_musculus 0 448
ENSMUST00000184986 Tac1-002 protein_coding Mus_musculus 0 326
ENSMUST00000185130 Tac1-005 protein_coding Mus_musculus 4e-38 163

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