C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine VII
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319518 CPNE7-001 ENSG00000178773 9606 + 16:89575791-89597246 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000319518
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000319518 0.126±0.00 2.610±2.34 0.230±0.02 0.223±0.00 1.031±0.00 0.119±0.00 0.154±0.00 0.153±0.00 0.043±0.00 2.805±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HA CIL_0008HA_0001 VISTA 16:89018329-89621235
CIL_0006AP CIL_0006AP_0002 CGP 16:89560657-89597246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005515 IEA protein binding
GO:0006629 TAS lipid metabolic process
GO:0006810 TAS transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037900 Cpne7-001 protein_coding Mus_musculus 0 1762
ENSMUST00000134235 Cpne7-003 retained_intron Mus_musculus 0 974
ENSMUST00000131659 Cpne7-002 retained_intron Mus_musculus 0 896
ENSMUST00000127431 Cpne7-004 retained_intron Mus_musculus 0 281

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