C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nescient helix loop helix 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320238 NHLH2-002 ENSG00000177551 9606 - 1:115836377-115841126 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLungOvaryPlacentaTestisENST00000320238
Transcript ID Adrenal Brain Heart Lung Ovary Placenta Testis
ENST00000320238 0.023±0.00 0.274±0.11 0.071±0.00 0.012±0.00 0.191±0.14 0.017±0.00 0.405±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HI CIL_0008HI_0001 VISTA 1:115492363-116093752

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001102 IPI RNA polymerase II activating transcription factor binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0007417 TAS central nervous system development
GO:0030154 IEA cell differentiation
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0051091 TAS positive regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066187 Nhlh2-201 protein_coding Mus_musculus 0 850

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