C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | signal sequence receptor, delta | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000320857  |
SSR4-005 |
ENSG00000180879 |
9606 | + |
X:153793516-153798498  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001UV | CIL_0001UV_0001 | CGP | X:153776412-153794523 |
| CIL_0001UU | CIL_0001UU_0001 | CGP | X:153785766-153798505 |
| CIL_0001UT | CIL_0001UT_0001 | CGP | X:153793516-153830565 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0005784 | NAS | Sec61 translocon complex |
| GO:0006412 | TAS | translation |
| GO:0006614 | TAS | SRP-dependent cotranslational protein targeting to membrane |
| GO:0010467 | TAS | gene expression |
| GO:0016021 | IEA | integral component of membrane |
| GO:0044267 | TAS | cellular protein metabolic process |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000166518
|
Ssr4-201 | protein_coding | Mus_musculus | 0 | 636 |
|
ENSMUST00000002090
|
Ssr4-001 | protein_coding | Mus_musculus | 0 | 623 |
|
ENSMUST00000130738
|
Ssr4-002 | retained_intron | Mus_musculus | 0 | 536 |
|
ENSMUST00000155552
|
Ssr4-005 | retained_intron | Mus_musculus | 0 | 427 |
|
ENSMUST00000129239
|
Ssr4-007 | retained_intron | Mus_musculus | 0 | 383 |
|
ENSMUST00000142829
|
Ssr4-006 | retained_intron | Mus_musculus | 0 | 237 |
|
ENSMUST00000136544
|
Ssr4-004 | retained_intron | Mus_musculus | 0 | 231 |
|
ENSMUST00000141721
|
Ssr4-003 | retained_intron | Mus_musculus | 0 | 219 |
