C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRIP and coiled-coil domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321407 GCC1-001 ENSG00000179562 9606 - 7:127580618-127585607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321407 4.519±0.00 5.783±0.00 1.558±0.00 2.364±1.21 4.010±1.58 2.184±0.80 1.541±0.74 4.562±1.17 3.064±0.11 2.555±0.58 2.248±1.40 7.636±3.35 6.095±1.76 9.844±2.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LN CIL_0008LN_0001 VISTA 7:127234332-127837492
CIL_0001OK CIL_0001OK_0001 CGP 7:127346790-127593611
CIL_0001OJ CIL_0001OJ_0001 CGP 7:127580618-127593611

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090511 Gcc1-002 protein_coding Mus_musculus 0 2894
ENSMUST00000064377 Gcc1-001 protein_coding Mus_musculus 0 2865
ENSMUST00000165455 Gcc1-004 protein_coding Mus_musculus 0 675
ENSMUST00000170767 Gcc1-003 protein_coding Mus_musculus 0.0000000002 73

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