C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 14 open reading frame 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321731 C14orf39-001 ENSG00000179008 9606 - 14:60435956-60486096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryTestisENST00000321731
Transcript ID Adrenal Breast Colon Ovary Testis
ENST00000321731 0.023±0.00 0.041±0.02 0.012±0.00 0.051±0.04 2.551±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S6 CIL_0000S6_0001 CGP 14:60245752-60515543
CIL_0008MW CIL_0008MW_0001 VISTA 14:60353481-60955733
CIL_0000RZ CIL_0000RZ_0001 CGP 14:60396469-60515543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007275 IEA multicellular organismal development
GO:0051090 NAS regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110489 4930447C04Rik-201 protein_coding Mus_musculus 0 1471
ENSMUST00000044000 4930447C04Rik-001 protein_coding Mus_musculus 0 1458
ENSMUST00000131033 4930447C04Rik-002 nonsense_mediated_decay Mus_musculus 0 595
ENSMUST00000132901 4930447C04Rik-008 retained_intron Mus_musculus 0 368
ENSMUST00000130635 4930447C04Rik-005 protein_coding Mus_musculus 0 302
ENSMUST00000132067 4930447C04Rik-003 protein_coding Mus_musculus 0 300

Loading