C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pipecolic acid oxidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323372 PIPOX-001 ENSG00000179761 9606 + 17:29042900-29057220 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverOvaryENST00000323372
Transcript ID Bladder Brain Kidney Liver Ovary
ENST00000323372 18.274±0.00 4.419±3.15 33.660±0.00 50.959±0.00 2.499±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WH CIL_0000WH_0002 CGP 17:28897781-28951771
CIL_00076L CIL_00076L_0002 CGP 17:28950513-29057220

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005777 IDA peroxisome
GO:0008115 IDA:IEA sarcosine oxidase activity
GO:0016491 IEA oxidoreductase activity
GO:0033514 IDA L-lysine catabolic process to acetyl-CoA via L-pipecolate
GO:0046653 IEA tetrahydrofolate metabolic process
GO:0050031 IDA L-pipecolate oxidase activity
GO:0055114 IEA:IDA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017597 Pipox-001 protein_coding Mus_musculus 0 1212
ENSMUST00000155401 Pipox-002 processed_transcript Mus_musculus 0 446
ENSMUST00000151383 Pipox-003 retained_intron Mus_musculus 0 307
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0.00004 55

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