C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromobox homolog 3 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000325243 CBX3P1-001 ENSG00000177447 9606 + 11:27806443-27806996 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartMusclePlacentaTestisENST00000325243
Transcript ID Adrenal Breast Colon Heart Muscle Placenta Testis
ENST00000325243 0.021±0.00 0.019±0.00 0.036±0.00 0.018±0.00 0.018±0.00 0.020±0.00 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RP CIL_0004RP_0002 CGP 11:27654893-28108308

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188772 Als2cr12-002 protein_coding Mus_musculus 0 327
ENSMUST00000094623 Cbx3-001 protein_coding Mus_musculus 0 628
ENSMUST00000031862 Cbx3-002 protein_coding Mus_musculus 0 628
ENSMUST00000114446 Cbx3-005 protein_coding Mus_musculus 0 628
ENSMUST00000141711 Cbx3-007 protein_coding Mus_musculus 0 448
ENSMUST00000091539 Gm6917-201 processed_pseudogene Mus_musculus 0 551
ENSMUST00000099421 Gm5792-201 processed_pseudogene Mus_musculus 0 542
ENSMUST00000091545 Gm6901-201 processed_pseudogene Mus_musculus 0 547
ENSMUST00000190083 RP23-231B19.1-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000091531 Gm5196-201 processed_pseudogene Mus_musculus 0 569
ENSMUST00000081455 Gm10068-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000181108 Gm6984-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000120402 Gm13118-001 processed_pseudogene Mus_musculus 0 558

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