C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 17 open reading frame 70
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327787 C17orf70-001 ENSG00000185504 9606 - 17:81539885-81552377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327787
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327787 2.024±0.00 0.277±0.00 0.709±0.28 0.660±0.52 2.057±0.00 2.203±0.00 4.698±0.00 1.952±1.80 0.711±0.30 4.567±0.00 5.249±1.97 2.900±0.96 1.840±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BP CIL_0003BP_0001 CGP 17:81528396-81553961
CIL_0003BK CIL_0003BK_0001 CGP 17:81539885-81648465

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006281 TAS DNA repair
GO:0043240 IEA Fanconi anaemia nuclear complex
GO:0045111 IDA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026448 2310003H01Rik-001 protein_coding Mus_musculus 0 1783
ENSMUST00000135635 2310003H01Rik-006 retained_intron Mus_musculus 0 1631
ENSMUST00000154826 2310003H01Rik-003 retained_intron Mus_musculus 0 1242

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