C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related subfamily, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328224 KCNA4-001 ENSG00000182255 9606 - 11:30009741-30017023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000328224
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000328224 0.173±0.00 0.382±0.05 0.053±0.00 0.591±0.00 0.043±0.02 0.073±0.00 0.028±0.00 0.020±0.01 0.049±0.00 0.143±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RL CIL_0004RL_0002 CGP 11:30009741-30235261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 TAS:IEA voltage-gated potassium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006813 TAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030955 IEA potassium ion binding
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037012 Kcna4-001 protein_coding Mus_musculus 0 4407
ENSMUST00000038695 Kcna2-201 protein_coding Mus_musculus 0 366
ENSMUST00000055064 Kcna10-001 protein_coding Mus_musculus 0 298

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