C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328939 KCNIP1-001 ENSG00000182132 9606 + 5:170504036-170736632 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyOvaryPlacentaTestisENST00000328939
Transcript ID Brain Breast Kidney Ovary Placenta Testis
ENST00000328939 4.289±2.82 0.039±0.00 1.095±0.00 0.605±0.00 0.244±0.00 2.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023U CIL_00023U_0001 CGP 5:170353487-170736632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005513 TAS detection of calcium ion
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007165 TAS:IEA signal transduction
GO:0007268 TAS synaptic transmission
GO:0034765 IEA regulation of ion transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065970 Kcnip1-002 protein_coding Mus_musculus 0 1197
ENSMUST00000101368 Kcnip1-003 protein_coding Mus_musculus 0 1009
ENSMUST00000109340 Kcnip1-001 protein_coding Mus_musculus 0 1009
ENSMUST00000135034 Kcnip1-004 processed_transcript Mus_musculus 0 340
ENSMUST00000154760 Kcnip1-005 processed_transcript Mus_musculus 0 248

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