C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: APC membrane recruitment protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330258 AMER1-002 ENSG00000184675 9606 - X:64185117-64205744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330258
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330258 0.564±0.00 0.651±0.00 0.413±0.00 0.436±0.10 0.557±0.04 0.458±0.04 0.565±0.23 1.111±0.07 0.582±0.27 0.430±0.08 0.540±0.25 1.428±0.99 0.394±0.13 0.522±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JJ CIL_0003JJ_0002 CGP X:63634967-64205744
CIL_0003JE CIL_0003JE_0002 CGP X:64185117-64230631

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IEA kidney development
GO:0005515 IPI protein binding
GO:0005546 IMP phosphatidylinositol-4,5-bisphosphate binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0008013 IDA beta-catenin binding
GO:0016055 IEA Wnt signaling pathway
GO:0060348 IEA bone development
GO:0060612 IEA adipose tissue development
GO:0060828 IMP regulation of canonical Wnt signaling pathway
GO:0072161 IEA mesenchymal cell differentiation involved in kidney development
GO:0090090 IMP negative regulation of canonical Wnt signaling pathway
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084535 Amer1-001 protein_coding Mus_musculus 0 1694

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