C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 397
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330501 ZNF397-001 ENSG00000186812 9606 + 18:35241037-35249803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330501
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330501 2.156±0.00 2.179±0.00 1.115±0.23 2.597±0.15 1.950±0.00 2.271±1.48 2.111±0.82 2.613±1.07 1.819±0.00 2.800±1.08 1.145±0.15 4.782±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064X CIL_00064X_0001 CGP 18:34976928-35267133
CIL_0005Q1 CIL_0005Q1_0001 CGP 18:35241030-35290245

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060762 Zfp397-201 protein_coding Mus_musculus 0 1805
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 3e-40 172
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 8.99999e-40 171
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 8.99999e-40 171
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 2e-32 147
ENSMUST00000187616 9830147E19Rik-201 protein_coding Mus_musculus 1e-28 134
ENSMUST00000098503 9830147E19Rik-003 protein_coding Mus_musculus 1e-28 134
ENSMUST00000107994 9830147E19Rik-001 processed_transcript Mus_musculus 1e-28 134
ENSMUST00000074369 Zfp825-201 protein_coding Mus_musculus 2e-21 110
ENSMUST00000072829 Zfp936-201 protein_coding Mus_musculus 3e-19 102
ENSMUST00000118425 Zfp389-001 processed_pseudogene Mus_musculus 7e-16 92
ENSMUST00000107992 Gm5595-001 protein_coding Mus_musculus 0.000000000000003 90
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 0.000000000000009 88
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000143639 Zfp932-005 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000125213 Zfp932-004 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000137573 Zfp866-001 protein_coding Mus_musculus 0.0000006 62
ENSMUST00000119821 Gm12080-001 processed_pseudogene Mus_musculus 0.000002 60
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.0003 53
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.0003 53
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.0003 53

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