C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, N-methyl D-aspartate 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330684 GRIN2A-002 ENSG00000183454 9606 - 16:9763061-10182406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENST00000330684
Transcript ID Breast Testis
ENST00000330684 0.107±0.00 0.188±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EM CIL_0000EM_0001 CGP 16:9091648-10182754

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0004972 IBA N-methyl-D-aspartate selective glutamate receptor activity
GO:0005234 IBA:IEA extracellular-glutamate-gated ion channel activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0007215 TAS glutamate receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007611 TAS learning or memory
GO:0008270 ISS zinc ion binding
GO:0009986 ISS cell surface
GO:0016020 IEA membrane
GO:0017146 IDA N-methyl-D-aspartate selective glutamate receptor complex
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0034220 IBA ion transmembrane transport
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0045211 IBA postsynaptic membrane
GO:0045471 IDA response to ethanol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115835 Grin2a-001 protein_coding Mus_musculus 0 5790
ENSMUST00000032331 Grin2a-201 protein_coding Mus_musculus 0 5402
ENSMUST00000111905 Grin2b-201 protein_coding Mus_musculus 0 869
ENSMUST00000053880 Grin2b-001 protein_coding Mus_musculus 0 869
ENSMUST00000156482 Grin2a-002 retained_intron Mus_musculus 0 839
ENSMUST00000106554 Grin2c-201 protein_coding Mus_musculus 0 649
ENSMUST00000003351 Grin2c-001 protein_coding Mus_musculus 0 649
ENSMUST00000002848 Grin2d-001 protein_coding Mus_musculus 0 560
ENSDART00000103882 grin2db-201 protein_coding Danio_rerio 0 536
ENSDART00000144062 grin2db-001 protein_coding Danio_rerio 0 536

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