C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: necdin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332303 NDNL2-001 ENSG00000185115 9606 - 15:29268149-29269829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332303
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332303 7.423±0.00 12.115±0.00 2.049±0.00 6.970±1.52 5.074±3.52 4.134±2.92 4.142±2.32 6.977±5.25 5.084±0.72 5.096±2.28 3.843±2.22 12.103±6.85 13.519±2.92 20.508±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HE CIL_0006HE_0001 CGP 15:28884483-29570723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000781 IEA chromosome, telomeric region
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0030915 IDA Smc5-Smc6 complex
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094331 Ndnl2-001 protein_coding Mus_musculus 0 684

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