C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332361 RP11-106A1.2-001 ENSG00000206147 9606 + 9:6639139-6639604 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverTestisENST00000332361
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Testis
ENST00000332361 0.351±0.00 0.418±0.00 0.391±0.00 0.505±0.00 0.239±0.00 0.349±0.00 0.139±0.00 0.333±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D8 CIL_0001D8_0001 CGP 9:6413151-6645650

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 551
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 542
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 518
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 510
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 505
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000105085 Gm10923-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000085632 Rpl23a-ps1-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000121008 Rpl23a-ps4-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000178439 Gm21959-201 processed_pseudogene Mus_musculus 0 379
ENSMUST00000187124 RP23-466F9.2-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000187903 RP23-349I9.24-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000105172 Gm6096-201 protein_coding Mus_musculus 0 346
ENSMUST00000191583 Rpl23a-ps11-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000187732 RP23-349I9.17-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000185244 RP23-349I9.15-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000188369 Rpl23a-ps9-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000187331 RP23-466F9.8-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000189660 RP23-466F9.10-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000187984 RP23-349I9.11-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000186898 RP23-466F9.4-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000185511 Rpl23a-ps10-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 0 291

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