C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 259
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333175 TMEM259-002 ENSG00000182087 9606 - 19:1009651-1021115 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000333175
Transcript ID Bladder Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000333175 1.778±0.00 12.283±0.00 11.039±0.00 6.030±0.00 0.880±0.00 10.093±6.76 4.477±0.00 21.255±0.00 34.200±0.00 46.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0005ZM CIL_0005ZM_0002 CGP 19:984271-1009732
CIL_0005ZF CIL_0005ZF_0002 CGP 19:1000419-1021179
CIL_0000I1 CIL_0000I1_0001 CGP 19:1009648-1039068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052885 Tmem259-001 protein_coding Mus_musculus 0 1288
ENSMUST00000124536 Tmem259-002 protein_coding Mus_musculus 0 904
ENSMUST00000132080 Tmem259-004 retained_intron Mus_musculus 0 499
ENSMUST00000126383 Tmem259-003 retained_intron Mus_musculus 0 235
ENSMUST00000124889 Tmem259-005 retained_intron Mus_musculus 2e-33 148

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