C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oligodendrocyte lineage transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333337 OLIG2-002 ENSG00000205927 9606 + 21:33025935-33029196 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryTestisENST00000333337
Transcript ID Adrenal Brain Ovary Testis
ENST00000333337 0.017±0.00 0.822±0.00 0.122±0.01 0.051±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0001 VISTA 21:32549146-33151638
CIL_00087M CIL_00087M_0001 VISTA 21:32616647-33220574
CIL_0009BQ CIL_0009BQ_0001 VISTA 21:32618474-33219807
CIL_0007UY CIL_0007UY_0001 VISTA 21:32793653-33396760
CIL_0007LZ CIL_0007LZ_0003 UCNEbase 21:32957570-33044921
CIL_0001C5 CIL_0001C5_0001 CGP 21:33025845-33072420

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003705 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007399 IEA nervous system development
GO:0021522 IEA spinal cord motor neuron differentiation
GO:0021529 IEA spinal cord oligodendrocyte cell differentiation
GO:0021530 IEA spinal cord oligodendrocyte cell fate specification
GO:0021794 IEA thalamus development
GO:0042552 IEA myelination
GO:0042803 IEA protein homodimerization activity
GO:0045665 IEA negative regulation of neuron differentiation
GO:0046983 IEA protein dimerization activity
GO:0048663 IEA neuron fate commitment
GO:0048709 IEA oligodendrocyte differentiation
GO:0048714 IEA positive regulation of oligodendrocyte differentiation
GO:0071837 IEA HMG box domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035608 Olig2-001 protein_coding Mus_musculus 0 1242

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