C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 555
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334241 ZNF555-001 ENSG00000186300 9606 + 19:2841435-2860484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyOvaryPlacentaTestisENST00000334241
Transcript ID Bladder Brain Colon Kidney Ovary Placenta Testis
ENST00000334241 0.548±0.00 0.555±0.00 0.392±0.12 0.458±0.27 0.241±0.12 0.281±0.19 0.812±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137573 Zfp866-001 protein_coding Mus_musculus 7e-28 132
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 3e-26 126
ENSMUST00000185796 Zfp442-201 protein_coding Mus_musculus 3e-21 110
ENSMUST00000109916 Zfp442-001 protein_coding Mus_musculus 3e-21 110
ENSMUST00000094538 Zfp120-201 protein_coding Mus_musculus 1e-20 108
ENSMUST00000142792 Zfp120-004 processed_transcript Mus_musculus 1e-20 108
ENSMUST00000089207 Zfp120-001 protein_coding Mus_musculus 1e-20 108
ENSMUST00000109931 Zfp120-003 protein_coding Mus_musculus 1e-20 108
ENSMUST00000122859 Zfp120-002 nonsense_mediated_decay Mus_musculus 1e-20 108
ENSMUST00000138130 3300002I08Rik-002 processed_transcript Mus_musculus 2e-19 104
ENSMUST00000152036 3300002I08Rik-003 processed_transcript Mus_musculus 2e-19 104
ENSMUST00000124945 3300002I08Rik-004 processed_transcript Mus_musculus 2e-19 104
ENSMUST00000051153 3300002I08Rik-001 protein_coding Mus_musculus 2e-19 104
ENSMUST00000109922 Gm14124-001 protein_coding Mus_musculus 2e-19 104
ENSMUST00000186475 protein_coding Mus_musculus 5e-19 102
ENSMUST00000187028 nonsense_mediated_decay Mus_musculus 5e-19 102
ENSMUST00000109914 Zfp345-001 protein_coding Mus_musculus 7e-18 99
ENSMUST00000073782 Zfp937-001 protein_coding Mus_musculus 7e-18 99
ENSMUST00000133235 Gm10130-201 protein_coding Mus_musculus 7e-18 99
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 3e-16 94
ENSMUST00000144786 Zfp113-003 processed_transcript Mus_musculus 3e-16 94
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 3e-16 94
ENSMUST00000109997 Zfp961-201 protein_coding Mus_musculus 0.000000002 71
ENSMUST00000133866 Zfp961-006 processed_transcript Mus_musculus 0.000000002 71
ENSMUST00000138304 Zfp961-004 processed_transcript Mus_musculus 0.000000002 71
ENSMUST00000131237 Zfp961-001 protein_coding Mus_musculus 0.000000002 71
ENSDART00000106568 CU695216.1-201 protein_coding Danio_rerio 0.00000002 68
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 0.00000007 66
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 0.00000007 66
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 0.00000007 66
ENSMUST00000161519 Zfp248-002 protein_coding Mus_musculus 0.0000009 62
ENSMUST00000069292 Zfp248-001 protein_coding Mus_musculus 0.0000009 62
ENSMUST00000164280 Zfp354b-201 protein_coding Mus_musculus 0.000003 60
ENSMUST00000109124 Zfp354b-001 protein_coding Mus_musculus 0.000003 60
ENSDART00000101354 zgc:174234-201 protein_coding Danio_rerio 0.00001 58
ENSDART00000058053 CABZ01075191.1-201 protein_coding Danio_rerio 0.00001 58
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.0006 53

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