C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type, 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334454 PSMB5-006 ENSG00000100804 9606 - 14:23026297-23034885 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334454
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334454 21.112±0.00 16.400±0.00 33.799±0.00 28.655±0.00 18.948±0.00 21.852±0.00 26.260±0.00 14.276±0.00 22.463±0.00 22.363±0.00 35.626±0.00 41.071±0.00 37.217±7.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ND CIL_0006ND_0001 CGP 14:22985908-23035230
CIL_0006NC CIL_0006NC_0001 CGP 14:23016543-23044276

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022803 Psmb5-201 protein_coding Mus_musculus 0 499
ENSMUST00000119744 Psmb5-ps-001 processed_pseudogene Mus_musculus 0 414
ENSDART00000113111 psmb5-001 protein_coding Danio_rerio 0 270

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