C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily R, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334636 CYP2R1-001 ENSG00000186104 9606 - 11:14877440-14892252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverOvaryENST00000334636
Transcript ID Colon Heart Liver Ovary
ENST00000334636 0.913±0.00 0.173±0.00 0.191±0.00 0.363±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZS CIL_0003ZS_0001 CGP 11:14643723-14892252
CIL_000419 CIL_000419_0002 CGP 11:14877440-15082342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006766 TAS vitamin metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0008202 TAS steroid metabolic process
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0030343 IEA vitamin D3 25-hydroxylase activity
GO:0036378 IEA calcitriol biosynthetic process from calciol
GO:0042359 TAS vitamin D metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032908 Cyp2r1-001 protein_coding Mus_musculus 0 1888
ENSMUST00000128587 Cyp2r1-006 nonsense_mediated_decay Mus_musculus 0 1016
ENSMUST00000133484 Cyp2r1-005 processed_transcript Mus_musculus 0 998
ENSMUST00000138712 Cyp2r1-002 nonsense_mediated_decay Mus_musculus 0 911
ENSMUST00000147428 Cyp2r1-004 nonsense_mediated_decay Mus_musculus 0 839
ENSMUST00000119712 Cyp2r1-003 protein_coding Mus_musculus 0 689

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