C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 36 (proton/amino acid symporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335244 SLC36A2-001 ENSG00000186335 9606 - 5:151314978-151347590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335244 0.096±0.00 0.332±0.00 8.300±0.00 0.142±0.00 0.755±0.00 0.070±0.00 0.141±0.00 1.546±0.00 0.042±0.00 0.076±0.00 7.224±0.13 0.063±0.04 0.042±0.00 0.309±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KY CIL_0001KY_0001 CGP 5:151276762-151347590
CIL_0001KX CIL_0001KX_0001 CGP 5:151314978-151492381

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005280 IEA hydrogen:amino acid symporter activity
GO:0005737 IEA cytoplasm
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006865 TAS amino acid transport
GO:0015180 IEA L-alanine transmembrane transporter activity
GO:0015187 IMP glycine transmembrane transporter activity
GO:0015193 IEA L-proline transmembrane transporter activity
GO:0015808 IEA L-alanine transport
GO:0015816 IEA glycine transport
GO:0015824 IEA proline transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane
GO:0035524 IMP proline transmembrane transport
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039305 Slc36a2-001 protein_coding Mus_musculus 0 1399
ENSMUST00000020499 Slc36a1-201 protein_coding Mus_musculus 0 780
ENSMUST00000108867 Slc36a1-002 protein_coding Mus_musculus 0 780
ENSMUST00000108872 Slc36a1-001 protein_coding Mus_musculus 0 780
ENSMUST00000125560 Slc36a2-002 processed_transcript Mus_musculus 0 765
ENSMUST00000128244 Slc36a3-003 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000020502 Slc36a3-001 protein_coding Mus_musculus 0 379

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