C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box K2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335255 FOXK2-001 ENSG00000141568 9606 + 17:82519715-82604607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000335255
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000335255 3.294±0.00 2.525±0.00 1.746±0.95 1.912±0.90 2.192±1.08 5.049±0.00 0.966±0.00 1.367±0.00 2.906±1.62 3.483±1.81 5.055±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054L CIL_00054L_0001 CGP 17:82458180-82644662
CIL_000440 CIL_000440_0002 CGP 17:82519713-82648553

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 IEA:NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:NAS regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043565 IEA:IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106113 Foxk2-001 protein_coding Mus_musculus 0 2266
ENSDART00000018159 FOXK2-001 protein_coding Danio_rerio 8.40779e-45 187
ENSMUST00000153579 Foxk2-002 processed_transcript Mus_musculus 4.99983e-42 178
ENSDART00000149387 foxk2-003 retained_intron Danio_rerio 1.99993e-41 176
ENSDART00000045071 foxk2-001 protein_coding Danio_rerio 1.99993e-41 176
ENSMUST00000072837 Foxk1-201 protein_coding Mus_musculus 2e-31 143

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