C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ovo-like zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335987 OVOL1-001 ENSG00000172818 9606 + 11:65787022-65797219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000335987
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000335987 0.007±0.00 0.050±0.00 0.270±0.00 0.052±0.00 0.125±0.00 0.756±0.14 1.436±0.00 0.205±0.00 0.150±0.00 1.838±0.13 2.839±1.57 2.528±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001822 IEA kidney development
GO:0005634 IEA nucleus
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007010 IEA cytoskeleton organization
GO:0007283 IEA spermatogenesis
GO:0007498 IEA mesoderm development
GO:0008544 IEA epidermis development
GO:0009913 IEA epidermal cell differentiation
GO:0043588 IEA skin development
GO:0046872 IEA metal ion binding
GO:0051729 IEA germline cell cycle switching, mitotic to meiotic cell cycle
GO:1901994 IEA negative regulation of meiotic cell cycle phase transition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025861 Ovol1-201 protein_coding Mus_musculus 0 1053

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