C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: torsin family 2, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336067 TOR2A-005 ENSG00000160404 9606 - 9:127731524-127735292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartPlacentaENST00000336067
Transcript ID Breast Colon Heart Placenta
ENST00000336067 1.582±0.00 0.501±0.00 0.210±0.00 2.703±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0001 VISTA 9:127227593-127829012
CIL_00075N CIL_00075N_0001 CGP 9:127716066-127735317
CIL_0002CG CIL_0002CG_0002 CGP 9:127731524-127778741

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005179 IEA hormone activity
GO:0005524 IEA ATP binding
GO:0005576 IEA extracellular region
GO:0051085 IEA chaperone mediated protein folding requiring cofactor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149987 Tor2a-006 retained_intron Mus_musculus 0 261
ENSMUST00000149720 Tor2a-007 retained_intron Mus_musculus 0 261
ENSMUST00000175763 Tor2a-009 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000009707 Tor2a-001 protein_coding Mus_musculus 0 261
ENSMUST00000156617 Tor2a-002 nonsense_mediated_decay Mus_musculus 0 250
ENSMUST00000140999 Tor2a-003 protein_coding Mus_musculus 9e-20 102

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