C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, sigma 2 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336418 AP3S2-001 ENSG00000157823 9606 - 15:89830599-89894342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336418
Transcript ID Adrenal Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336418 3.165±0.00 1.085±0.00 2.113±0.00 4.109±2.75 5.451±2.56 2.180±0.11 2.564±0.00 4.706±1.03 2.252±0.93 3.301±0.76 4.717±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000594 CIL_000594_0001 CGP 15:89784889-89894638
CIL_0007EL CIL_0007EL_0001 CGP 15:89830599-89912882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0008089 ISS anterograde axon cargo transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0030123 IDA AP-3 adaptor complex
GO:0031410 IEA cytoplasmic vesicle
GO:0048490 ISS anterograde synaptic vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075657 Ap3s2-201 protein_coding Mus_musculus 0 826
ENSMUST00000183332 Rbm4b-007 retained_intron Mus_musculus 0.0001 55

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