C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor receptor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336553 FGFR2-003 ENSG00000066468 9606 - 10:121483718-121598396 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000336553
Transcript ID Brain
ENST00000336553 10.270±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0001 CGP 10:120851175-121598458
CIL_0007TN CIL_0007TN_0001 VISTA 10:121051688-121653399
CIL_0001BE CIL_0001BE_0001 CGP 10:121478334-121928801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005007 IEA fibroblast growth factor-activated receptor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006468 IEA protein phosphorylation
GO:0008284 IEA positive regulation of cell proliferation
GO:0008543 IEA fibroblast growth factor receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048701 IEA embryonic cranial skeleton morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119260 Fgfr2-011 protein_coding Mus_musculus 0 2586
ENSMUST00000122054 Fgfr2-004 protein_coding Mus_musculus 0 2558
ENSMUST00000117073 Fgfr2-020 protein_coding Mus_musculus 0 2505
ENSMUST00000117872 Fgfr2-002 protein_coding Mus_musculus 0 2505
ENSMUST00000120141 Fgfr2-015 protein_coding Mus_musculus 0 2398
ENSMUST00000118296 Fgfr2-018 protein_coding Mus_musculus 0 2370
ENSMUST00000117089 Fgfr2-012 protein_coding Mus_musculus 0 2228
ENSMUST00000117858 Fgfr2-014 protein_coding Mus_musculus 0 2200
ENSMUST00000117691 Fgfr2-013 protein_coding Mus_musculus 0 2200
ENSMUST00000122448 Fgfr2-017 protein_coding Mus_musculus 0 2148
ENSMUST00000117357 Fgfr2-016 protein_coding Mus_musculus 0 2148
ENSMUST00000117754 Fgfr2-009 protein_coding Mus_musculus 0 2130
ENSMUST00000121080 Fgfr2-019 protein_coding Mus_musculus 0 2121
ENSMUST00000120187 Fgfr2-003 protein_coding Mus_musculus 0 2121
ENSMUST00000121064 Fgfr2-008 protein_coding Mus_musculus 0 1772
ENSMUST00000153166 Fgfr2-001 nonsense_mediated_decay Mus_musculus 0 1605
ENSMUST00000120715 Fgfr2-010 protein_coding Mus_musculus 0 1604
ENSDART00000150061 fgfr2-005 protein_coding Danio_rerio 0 926
ENSDART00000098269 fgfr2-003 protein_coding Danio_rerio 0 907
ENSDART00000080916 fgfr2-202 protein_coding Danio_rerio 0 904
ENSDART00000149125 fgfr2-002 protein_coding Danio_rerio 0 904
ENSMUST00000129542 Fgfr2-025 retained_intron Mus_musculus 0 741
ENSMUST00000133806 Fgfr2-022 retained_intron Mus_musculus 0 621
ENSDART00000080914 fgfr2-201 protein_coding Danio_rerio 0 606
ENSDART00000149602 fgfr2-004 protein_coding Danio_rerio 0 606
ENSMUST00000124096 Fgfr2-007 protein_coding Mus_musculus 0 573
ENSDART00000125883 fgfr3-202 protein_coding Danio_rerio 0 466
ENSDART00000013534 fgfr3-201 protein_coding Danio_rerio 0 466
ENSDART00000075259 fgfr1b-202 protein_coding Danio_rerio 0 451
ENSDART00000067689 fgfr1b-201 protein_coding Danio_rerio 0 436
ENSMUST00000147859 Fgfr2-024 retained_intron Mus_musculus 0 424
ENSMUST00000148675 Fgfr2-023 retained_intron Mus_musculus 0 422
ENSMUST00000127091 Fgfr2-021 nonsense_mediated_decay Mus_musculus 0 420
ENSMUST00000136264 Fgfr2-026 retained_intron Mus_musculus 0 418
ENSMUST00000129103 Fgfr2-005 retained_intron Mus_musculus 0 302

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