C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336755 ZCCHC7-003 ENSG00000147905 9606 + 9:37120539-37358149 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336755
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336755 2.510±0.00 2.940±0.00 1.277±0.19 2.932±0.72 2.440±1.20 1.666±0.00 2.532±0.00 1.521±0.57 2.187±1.51 0.796±0.00 3.953±1.26 3.009±0.89 7.113±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K7 CIL_0006K7_0001 CGP 9:36833275-37358149
CIL_000843 CIL_000843_0001 VISTA 9:36915019-37515778
CIL_0008YP CIL_0008YP_0001 VISTA 9:36951210-37552226
CIL_0007LK CIL_0007LK_0001 UCNEbase 9:36978917-37340407
CIL_00080S CIL_00080S_0001 VISTA 9:37036633-37638309
CIL_00035L CIL_00035L_0001 CGP 9:37120539-37436990

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107824 Zcchc7-003 protein_coding Mus_musculus 0 1192
ENSMUST00000144436 Zcchc7-005 retained_intron Mus_musculus 0 937
ENSMUST00000067521 Zcchc7-004 retained_intron Mus_musculus 0 819
ENSMUST00000142714 Zcchc7-006 nonsense_mediated_decay Mus_musculus 0 616
ENSMUST00000143385 Zcchc7-008 protein_coding Mus_musculus 0 429
ENSMUST00000107823 Zcchc7-009 processed_transcript Mus_musculus 0 305
ENSMUST00000154121 Zcchc7-007 protein_coding Mus_musculus 2e-39 169

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