C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB27A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336787 RAB27A-201 ENSG00000069974 9606 - 15:55202969-55289815 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverLungOvaryPlacentaTestisENST00000336787
Transcript ID Adipose Adrenal Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000336787 5.223±0.00 8.866±0.00 8.923±0.00 6.530±0.00 7.774±0.00 14.535±0.00 5.582±1.14 5.158±0.45 6.117±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 ISS:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 ISS:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006887 IDA exocytosis
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0010628 IMP positive regulation of gene expression
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 IDA GDP binding
GO:0019882 IMP antigen processing and presentation
GO:0030425 IDA dendrite
GO:0032585 IDA multivesicular body membrane
GO:0036257 IMP multivesicular body organization
GO:0042470 IDA melanosome
GO:0044267 TAS cellular protein metabolic process
GO:0045921 IMP positive regulation of exocytosis
GO:0048489 TAS synaptic vesicle transport
GO:0070062 IDA extracellular vesicular exosome
GO:0070382 IDA exocytic vesicle
GO:0071985 IMP multivesicular body sorting pathway
GO:1903307 IGI positive regulation of regulated secretory pathway
GO:1903435 IMP positive regulation of constitutive secretory pathway
GO:1990182 IMP exosomal secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034722 Rab27a-003 protein_coding Mus_musculus 0 809
ENSMUST00000184146 Rab27a-001 protein_coding Mus_musculus 0 809
ENSMUST00000184575 Rab27a-004 retained_intron Mus_musculus 0 442
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000001 60

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