C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-terminal binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337195 CTBP2-001 ENSG00000175029 9606 - 10:124984317-125160513 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000337195
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000337195 4.265±0.00 6.043±0.00 4.941±0.00 6.257±4.06 0.615±0.00 6.579±0.00 0.942±0.10 11.533±0.00 6.073±3.81 5.547±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084V CIL_00084V_0001 VISTA 10:124437964-125038882
CIL_0001V2 CIL_0001V2_0001 CGP 10:124801785-124988189
CIL_0009BC CIL_0009BC_0001 VISTA 10:124916753-125517434
CIL_0003UU CIL_0003UU_0001 CGP 10:124942123-125161170
CIL_0001V4 CIL_0001V4_0001 CGP 10:124984317-125683144

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008152 IEA metabolic process
GO:0008285 TAS negative regulation of cell proliferation
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0017053 ISS transcriptional repressor complex
GO:0019079 TAS viral genome replication
GO:0030054 IEA cell junction
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0050872 ISS white fat cell differentiation
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033269 Ctbp2-001 protein_coding Mus_musculus 0 2447
ENSMUST00000166439 Ctbp2-002 protein_coding Mus_musculus 0 1978
ENSMUST00000169570 Ctbp2-004 protein_coding Mus_musculus 0 1977
ENSMUST00000165457 Ctbp2-003 nonsense_mediated_decay Mus_musculus 0 1977
ENSMUST00000172341 Ctbp2-012 protein_coding Mus_musculus 0 878
ENSMUST00000079746 Ctbp1-201 protein_coding Mus_musculus 0 747
ENSMUST00000168958 Ctbp2-018 protein_coding Mus_musculus 0 699
ENSMUST00000171882 Ctbp2-020 protein_coding Mus_musculus 0 477
ENSMUST00000170459 Ctbp2-009 protein_coding Mus_musculus 0 475
ENSMUST00000164896 Ctbp2-007 processed_transcript Mus_musculus 0 472
ENSMUST00000166400 Ctbp2-008 processed_transcript Mus_musculus 0 472
ENSMUST00000106157 Zranb1-001 protein_coding Mus_musculus 0 379
ENSMUST00000033265 Zranb1-201 protein_coding Mus_musculus 0 329
ENSMUST00000167218 Ctbp2-010 protein_coding Mus_musculus 0 300
ENSMUST00000171727 Ctbp2-013 processed_transcript Mus_musculus 0 300
ENSMUST00000155996 Ctbp2-015 protein_coding Mus_musculus 0 287
ENSMUST00000164739 Ctbp2-014 processed_transcript Mus_musculus 0 241
ENSMUST00000165534 Ctbp2-011 processed_transcript Mus_musculus 0 241
ENSMUST00000171022 Ctbp2-016 protein_coding Mus_musculus 0 219

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