C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Wilms tumor 1 associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337387 WTAP-002 ENSG00000146457 9606 + 6:159727588-159749415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000337387
Transcript ID Placenta
ENST00000337387 29.542±3.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0001 VISTA 6:159654795-160257694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000381 IMP regulation of alternative mRNA splicing, via spliceosome
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0007049 IEA cell cycle
GO:0008380 IEA RNA splicing
GO:0016607 IDA nuclear speck
GO:0031965 IDA nuclear membrane
GO:0036396 IDA MIS complex
GO:0080009 IMP mRNA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159986 Wtap-004 protein_coding Mus_musculus 0 1925
ENSMUST00000160781 Wtap-003 protein_coding Mus_musculus 0 1890
ENSMUST00000007007 Wtap-001 protein_coding Mus_musculus 0 713
ENSMUST00000118761 Gm14292-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000159551 Wtap-002 protein_coding Mus_musculus 0 678
ENSMUST00000159104 Wtap-007 protein_coding Mus_musculus 0 575
ENSMUST00000098958 Gm7381-201 processed_pseudogene Mus_musculus 0 427
ENSMUST00000162395 Wtap-005 protein_coding Mus_musculus 0 335
ENSDART00000147359 wtap-002 protein_coding Danio_rerio 0 335
ENSDART00000062552 wtap-001 protein_coding Danio_rerio 0 320
ENSMUST00000161901 Wtap-006 processed_transcript Mus_musculus 5.00264e-43 180

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