C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 394
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337673 ZNF394-001 ENSG00000160908 9606 - 7:99493240-99500297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337673
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337673 6.324±0.00 8.865±0.00 1.262±0.00 1.872±1.09 4.167±1.67 4.162±0.97 5.879±0.00 7.112±0.00 1.298±0.06 5.480±4.56 2.042±0.00 6.192±3.29 4.929±3.17 8.520±2.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TF CIL_0004TF_0001 CGP 7:99486519-99534700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 1e-39 169
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 5e-39 167
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 5e-39 167
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 5e-39 167
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 2e-37 161
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 6e-33 147
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 1e-30 139
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 1e-30 139
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 1e-19 102
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 1e-19 102
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 1e-19 102
ENSMUST00000074941 Zfp35-001 protein_coding Mus_musculus 0.000000000002 79
ENSMUST00000172448 Zfp27-201 protein_coding Mus_musculus 0.000003 58
ENSMUST00000159920 Zfp27-002 protein_coding Mus_musculus 0.000003 58
ENSMUST00000053521 Zfp27-003 protein_coding Mus_musculus 0.000003 58
ENSMUST00000161904 Zfp27-004 protein_coding Mus_musculus 0.000003 58
ENSMUST00000162592 Zfp27-001 protein_coding Mus_musculus 0.000003 58
ENSDART00000122004 zgc:174694-201 protein_coding Danio_rerio 0.00001 57
ENSDART00000114649 zgc:174694-001 protein_coding Danio_rerio 0.00001 57
ENSDART00000152058 si:dkey-16b10.3-001 processed_pseudogene Danio_rerio 0.00004 55
ENSMUST00000081582 Zfp953-001 protein_coding Mus_musculus 0.0001 53
ENSDART00000135452 si:dkey-82i20.2-201 protein_coding Danio_rerio 0.0001 53
ENSDART00000150675 si:dkey-82i20.2-001 protein_coding Danio_rerio 0.0001 53
ENSDART00000127349 CABZ01051641.1-201 protein_coding Danio_rerio 0.0001 53
ENSDART00000122771 BX511078.1-201 protein_coding Danio_rerio 0.0001 53
ENSDART00000137584 CR382294.1-201 protein_coding Danio_rerio 0.0001 53
ENSDART00000131556 si:dkey-220a11.10-201 protein_coding Danio_rerio 0.0001 53
ENSDART00000150808 si:dkey-220a11.10-001 protein_coding Danio_rerio 0.0001 53
ENSDART00000139554 BX324003.3-201 protein_coding Danio_rerio 0.0001 53
ENSDART00000150567 si:dkeyp-35e5.9-001 protein_coding Danio_rerio 0.0001 53

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