C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class II, type 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338821 ATP9A-003 ENSG00000054793 9606 - 20:51596514-51768634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338821 10.248±0.00 3.555±0.00 0.380±0.00 27.432±5.42 14.238±5.10 7.254±1.30 4.144±0.00 3.041±0.00 2.481±1.35 4.757±2.10 2.624±0.65 7.233±4.84 1.428±0.20 8.439±1.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HZ CIL_0007HZ_0001 CGP 20:51386957-51768634
CIL_0007I5 CIL_0007I5_0001 CGP 20:51596514-51802520

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005769 IDA early endosome
GO:0005802 IDA trans-Golgi network
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055037 IDA recycling endosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029060 Atp9a-201 protein_coding Mus_musculus 0 3840
ENSMUST00000109176 Atp9a-002 protein_coding Mus_musculus 0 3840
ENSMUST00000178504 Atp9a-202 protein_coding Mus_musculus 0 3834
ENSMUST00000109177 Atp9a-001 protein_coding Mus_musculus 0 3733
ENSMUST00000109175 Atp9a-003 protein_coding Mus_musculus 0 3731
ENSMUST00000140188 Atp9a-004 retained_intron Mus_musculus 0 1832

Loading