C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 746
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340622 ZNF746-001 ENSG00000181220 9606 - 7:149472794-149497817 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungOvaryPlacentaTestisENST00000340622
Transcript ID Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000340622 2.349±0.35 0.637±0.00 0.669±0.36 1.071±0.26 0.559±0.00 2.484±0.07 2.728±1.91 5.811±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XP CIL_0004XP_0001 CGP 7:149431363-149497817
CIL_0004Y0 CIL_0004Y0_0001 CGP 7:149472794-149734575

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003676 IEA nucleic acid binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031625 IPI ubiquitin protein ligase binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:1901216 IDA positive regulation of neuron death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073124 Zfp746-201 protein_coding Mus_musculus 0 2418
ENSMUST00000156500 Zfp212-002 retained_intron Mus_musculus 0 291
ENSMUST00000009411 Zfp212-001 protein_coding Mus_musculus 0 291
ENSMUST00000125957 Zfp282-002 retained_intron Mus_musculus 0 263
ENSMUST00000061890 Zfp282-001 protein_coding Mus_musculus 0 263
ENSMUST00000079881 Zfp398-001 protein_coding Mus_musculus 7.00649e-45 187
ENSMUST00000146202 Zfp398-003 retained_intron Mus_musculus 7.00649e-45 187
ENSMUST00000140719 Zfp956-002 nonsense_mediated_decay Mus_musculus 1.96182e-44 185
ENSMUST00000174790 Zfp956-003 retained_intron Mus_musculus 1.96182e-44 185
ENSMUST00000101445 Zfp956-001 protein_coding Mus_musculus 1.96182e-44 185
ENSMUST00000122048 Gm1401-001 processed_pseudogene Mus_musculus 9e-34 150

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