C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: papilin, proteoglycan-like sulfated glycoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340738 PAPLN-001 ENSG00000100767 9606 + 14:73237497-73274640 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLungOvaryTestisENST00000340738
Transcript ID Adrenal Brain Colon Heart Lung Ovary Testis
ENST00000340738 7.697±0.00 0.992±0.00 1.316±0.00 0.439±0.00 1.808±0.00 1.560±0.79 3.535±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0001 VISTA 14:72878760-73482269
CIL_0001TQ CIL_0001TQ_0001 CGP 14:73136418-73274640
CIL_0001TR CIL_0001TR_0001 CGP 14:73237497-73463642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0004867 IEA serine-type endopeptidase inhibitor activity
GO:0005515 IEA protein binding
GO:0005604 IEA basement membrane
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021646 Papln-002 protein_coding Mus_musculus 0 1978
ENSMUST00000121733 Papln-001 protein_coding Mus_musculus 0 1605
ENSMUST00000152904 Papln-003 retained_intron Mus_musculus 0 614
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00003 57

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