C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340958 CLDN4-201 ENSG00000189143 9606 + 7:73830863-73832693 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340958
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340958 1.411±0.00 0.206±0.00 3.286±0.00 0.100±0.00 26.608±9.14 29.618±11.19 27.466±27.41 3.692±3.17 49.526±43.72 0.920±0.83 95.714±91.52 97.353±27.01 4.563±4.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005198 IEA structural molecule activity
GO:0005886 TAS plasma membrane
GO:0005887 IMP integral component of plasma membrane
GO:0005923 ISS tight junction
GO:0007165 TAS signal transduction
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding
GO:0061436 IMP establishment of skin barrier

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094245 Cldn3-001 protein_coding Mus_musculus 0 344
ENSMUST00000051401 Cldn4-201 protein_coding Mus_musculus 1e-19 102

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