C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2ad
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341023 HIST1H2AD-001 ENSG00000196866 9606 - 6:26198851-26199243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341023 0.184±0.00 1.570±0.00 3.955±0.00 3.820±3.33 21.110±21.00 70.518±0.00 2.366±2.27 2.050±1.83 7.769±7.38 14.159±11.10 3.869±0.00 15.857±26.46 0.815±0.41 1.191±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0003 CGP 6:26198851-26199939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0008150 ND biological_process
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070124 Hist1h2ai-001 protein_coding Mus_musculus 0 457
ENSMUST00000091751 Hist1h2an-001 protein_coding Mus_musculus 0 455
ENSMUST00000078369 Hist1h2ab-001 protein_coding Mus_musculus 0 455
ENSMUST00000090776 Hist1h2ad-001 protein_coding Mus_musculus 0 449
ENSMUST00000091741 Hist1h2ag-001 protein_coding Mus_musculus 0 449
ENSMUST00000091742 Hist1h2ah-001 protein_coding Mus_musculus 0 449
ENSMUST00000081342 Hist1h2ap-001 protein_coding Mus_musculus 0 449
ENSMUST00000091745 Hist1h2ao-001 protein_coding Mus_musculus 0 449
ENSMUST00000073261 Hist1h2af-001 protein_coding Mus_musculus 0 438
ENSMUST00000171127 Hist1h2ac-001 protein_coding Mus_musculus 0 438
ENSMUST00000078756 Hist2h2aa2-001 protein_coding Mus_musculus 0 435
ENSMUST00000074976 Hist2h2aa1-001 protein_coding Mus_musculus 0 435
ENSMUST00000102969 Hist1h2ae-001 protein_coding Mus_musculus 0 433
ENSMUST00000074752 Hist1h2ak-001 protein_coding Mus_musculus 0 418
ENSMUST00000091708 Hist1h2al-201 protein_coding Mus_musculus 0 418
ENSMUST00000090782 Hist2h2ac-001 protein_coding Mus_musculus 0 398
ENSMUST00000052686 H2afx-001 protein_coding Mus_musculus 0 385
ENSMUST00000091710 Hist1h2aj-001 unprocessed_pseudogene Mus_musculus 0 381
ENSMUST00000074556 H2afj-001 protein_coding Mus_musculus 0 364
ENSDART00000073404 protein_coding Danio_rerio 0 315
ENSDART00000129239 protein_coding Danio_rerio 0 307
ENSMUST00000073115 Hist2h2ab-001 protein_coding Mus_musculus 0 298
ENSDART00000110632 protein_coding Danio_rerio 0 287
ENSMUST00000072391 Hist1h2aa-001 protein_coding Mus_musculus 0 283
ENSDART00000040328 h2afx-001 protein_coding Danio_rerio 0 274
ENSMUST00000118168 Gm11336-001 unprocessed_pseudogene Mus_musculus 0 267
ENSDART00000073402 protein_coding Danio_rerio 0 263

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