C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin leucine rich transmembrane protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341420 FLRT3-003 ENSG00000125848 9606 - 20:14323995-14337616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341420
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341420 0.038±0.00 0.538±0.00 3.537±0.00 2.187±0.00 0.333±0.22 0.453±0.03 0.071±0.00 0.328±0.00 1.358±0.23 5.034±0.12 0.572±0.32 0.966±0.79 0.681±0.32 0.785±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DE CIL_0002DE_0001 CGP 20:13849247-16053197
CIL_0002DF CIL_0002DF_0001 CGP 20:13995369-16053197
CIL_0002DG CIL_0002DG_0001 CGP 20:14322988-16573433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005057 NAS receptor signaling protein activity
GO:0005515 IEA protein binding
GO:0005578 NAS proteinaceous extracellular matrix
GO:0005887 NAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0008150 ND biological_process
GO:0030674 NAS protein binding, bridging
GO:0035556 NAS intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110057 Flrt3-001 protein_coding Mus_musculus 0 3753
ENSMUST00000056760 Flrt3-002 protein_coding Mus_musculus 0 3186
ENSDART00000143703 flrt3-001 protein_coding Danio_rerio 0 339

Loading