C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 61
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342073 HNRNPA1P61-001 ENSG00000187999 9606 + 2:33636502-33637425 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverMuscleOvaryTestisENST00000342073
Transcript ID Adrenal Brain Kidney Liver Muscle Ovary Testis
ENST00000342073 0.028±0.00 0.082±0.05 0.140±0.00 0.079±0.00 0.162±0.15 0.171±0.15 0.094±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N0 CIL_0000N0_0001 CGP 2:33583658-36551135

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1048
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1048
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 966
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 859
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 859
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 662
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000118273 Gm6491-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 425

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