C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudE neurodevelopment protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342673 NDE1-201 ENSG00000072864 9606 + 16:15664723-15726353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000342673
Transcript ID Brain
ENST00000342673 0.838±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UO CIL_0006UO_0001 CGP 16:15594386-15726353
CIL_0006MU CIL_0006MU_0001 CGP 16:15643267-15857033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000132 IMP establishment of mitotic spindle orientation
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0007067 IEA mitotic nuclear division
GO:0008017 ISS microtubule binding
GO:0016020 IDA membrane
GO:0021987 IMP cerebral cortex development
GO:0031616 ISS spindle pole centrosome
GO:0051298 ISS centrosome duplication
GO:0051303 IMP establishment of chromosome localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115795 Nde1-008 protein_coding Mus_musculus 0 950
ENSMUST00000117958 Nde1-006 protein_coding Mus_musculus 0 950
ENSMUST00000023359 Nde1-001 protein_coding Mus_musculus 0 950
ENSMUST00000156041 Nde1-004 retained_intron Mus_musculus 0 573

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