C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 12 (sodium/potassium/chloride transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343225 SLC12A2-004 ENSG00000064651 9606 + 5:128083848-128188442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungENST00000343225
Transcript ID Brain Heart Lung
ENST00000343225 2.587±0.00 0.382±0.00 1.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CW CIL_0006CW_0002 CGP 5:127649044-128189688
CIL_00041L CIL_00041L_0001 CGP 5:128083766-128659185

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 TAS:IEA ion transport
GO:0008519 IDA ammonium transmembrane transporter activity
GO:0015377 IEA cation:chloride symporter activity
GO:0015696 IDA ammonium transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030321 IDA transepithelial chloride transport
GO:0031982 IDA vesicle
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0070634 IDA transepithelial ammonium transport
GO:0072488 IDA ammonium transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115366 Slc12a2-201 protein_coding Mus_musculus 0 3657

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