C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS protein activator like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343625 RASAL3-001 ENSG00000105122 9606 - 19:15451624-15464571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000343625
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000343625 1.458±0.00 9.981±0.00 0.176±0.00 0.366±0.00 1.012±0.30 0.311±0.00 0.134±0.00 0.651±0.00 0.420±0.01 1.661±0.84 0.688±0.36 1.679±0.94 0.235±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IV CIL_0000IV_0001 CGP 19:15419980-15464571
CIL_00019W CIL_00019W_0001 CGP 19:15451624-15498956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005099 IBA Ras GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0007165 IEA signal transduction
GO:0016020 IDA membrane
GO:0031235 IBA intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032318 IEA regulation of Ras GTPase activity
GO:0032320 IBA positive regulation of Ras GTPase activity
GO:0046580 IBA negative regulation of Ras protein signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135618 Rasal3-005 protein_coding Mus_musculus 0 2359
ENSMUST00000063824 Rasal3-001 protein_coding Mus_musculus 0 2331
ENSMUST00000142203 Rasal3-003 retained_intron Mus_musculus 0 2174
ENSMUST00000137458 Rasal3-002 protein_coding Mus_musculus 0 2122
ENSMUST00000136375 Rasal3-004 nonsense_mediated_decay Mus_musculus 0 1341
ENSMUST00000143808 Rasal3-008 retained_intron Mus_musculus 0 412
ENSMUST00000135560 Rasal3-006 retained_intron Mus_musculus 0 281

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