C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microspherule protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343810 MCRS1-001 ENSG00000187778 9606 - 12:49558320-49568153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343810
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343810 3.464±0.00 4.647±0.00 0.657±0.00 5.049±2.84 3.995±3.34 5.481±0.00 12.807±12.18 9.976±0.00 10.122±0.00 3.143±2.35 2.947±2.15 22.331±5.14 22.751±6.20 22.521±2.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009M CIL_00009M_0001 CGP 12:49366584-49558308
CIL_00009P CIL_00009P_0001 CGP 12:49539157-49568153

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000123 IDA histone acetyltransferase complex
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 TAS cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006464 TAS cellular protein modification process
GO:0031011 IDA Ino80 complex
GO:0043981 IDA histone H4-K5 acetylation
GO:0043982 IDA histone H4-K8 acetylation
GO:0043984 IDA histone H4-K16 acetylation
GO:0043995 IDA histone acetyltransferase activity (H4-K5 specific)
GO:0043996 IDA histone acetyltransferase activity (H4-K8 specific)
GO:0046972 IDA histone acetyltransferase activity (H4-K16 specific)
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041190 Mcrs1-201 protein_coding Mus_musculus 0 2250
ENSMUST00000163506 Mcrs1-202 protein_coding Mus_musculus 0 1975
ENSMUST00000118978 Gm13127-001 processed_pseudogene Mus_musculus 0 1879

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