C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin, actin binding protein, 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343933 CORO2A-001 ENSG00000106789 9606 - 9:98120975-98172884 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENST00000343933
Transcript ID Breast Ovary
ENST00000343933 0.208±0.00 2.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0001 VISTA 9:97562581-98164397
CIL_000853 CIL_000853_0001 VISTA 9:97573936-98178227
CIL_0009AR CIL_0009AR_0001 VISTA 9:97573936-98175680
CIL_00029O CIL_00029O_0001 CGP 9:98069275-98192640
CIL_00029Y CIL_00029Y_0001 CGP 9:98120975-98255721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0015629 IBA actin cytoskeleton
GO:0017053 IDA transcriptional repressor complex
GO:0030036 IBA actin cytoskeleton organization
GO:0035556 TAS intracellular signal transduction
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030021 Coro2a-201 protein_coding Mus_musculus 0 1659
ENSMUST00000107757 Coro2a-002 protein_coding Mus_musculus 0 1659
ENSMUST00000107756 Coro2a-001 protein_coding Mus_musculus 0 1657
ENSMUST00000139179 Coro2a-003 retained_intron Mus_musculus 0 1098
ENSMUST00000135062 Coro2a-006 processed_transcript Mus_musculus 0 331
ENSMUST00000129121 Coro2a-004 retained_intron Mus_musculus 0 265
ENSMUST00000134661 Knstrn-001 protein_coding Mus_musculus 0.00003 57
ENSMUST00000021864 Ssr1-201 protein_coding Mus_musculus 0.00003 57

Loading