C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial transcription termination factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000351870 MTERF1-003 ENSG00000127989 9606 - 7:91872891-91880720 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000351870
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000351870 0.483±0.00 1.588±0.00 1.011±0.18 0.848±0.00 0.877±0.44 0.714±0.63 2.098±0.59 0.985±0.32 0.557±0.32 0.504±0.00 1.561±1.05 0.865±0.46 1.956±1.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SZ CIL_0004SZ_0002 CGP 7:91692008-92110673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003690 IDA:IEA double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005739 TAS:IEA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006353 IDA DNA-templated transcription, termination
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006390 TAS transcription from mitochondrial promoter
GO:0006393 IDA termination of mitochondrial transcription
GO:0010467 TAS gene expression
GO:0032392 IDA DNA geometric change
GO:0042645 IDA mitochondrial nucleoid
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177258 Mterf1b-001 protein_coding Mus_musculus 0 966
ENSMUST00000117463 Mterf1a-002 protein_coding Mus_musculus 0 961
ENSMUST00000044746 Mterf1a-001 protein_coding Mus_musculus 0 961

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