C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerophosphodiester phosphodiesterase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000353258 GDE1-001 ENSG00000006007 9606 - 16:19501689-19522145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000353258
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000353258 2.199±0.00 2.528±0.00 0.915±0.00 2.911±0.88 3.187±1.85 2.190±0.00 2.824±1.71 3.149±0.00 1.473±0.00 3.090±0.33 0.948±0.34 4.655±1.23 7.542±0.53 3.606±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MY CIL_0006MY_0001 CGP 16:19410496-19522145
CIL_0006MZ CIL_0006MZ_0001 CGP 16:19501689-19553408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA:TAS lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA:TAS glycerophosphodiester phosphodiesterase activity
GO:0016021 TAS integral component of membrane
GO:0046872 IEA metal ion binding
GO:0047395 IEA glycerophosphoinositol glycerophosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038791 Gde1-001 protein_coding Mus_musculus 0 1177
ENSMUST00000174545 Xpo4-001 protein_coding Mus_musculus 0.0002 53

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